CZ:Biology Workgroup: Difference between revisions

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imported>Chris day
(→‎[[Botany]]: more pruning)
imported>DavidGoodman
(italics--another proposal, see talk)
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=== Biography ===
=== Biography ===
* (I could proofread any of these--David Goodman)
* (I could proofread any of these--David Goodman)
# [[Charles Darwin]] - [[User:DavidGoodman|DG]]
# [[Charles Darwin]] - [[User:DavidGoodman|DG]] (but this is a difficult article to start with)
# [[Carolus Linnaeus]] -  
# [[Carolus Linnaeus]] -  
# [[Antoni_van_Leeuwenhoek]]
''# [[Antoni_van_Leeuwenhoek]]''
===[[Anatomy]] ===
===[[Anatomy]] ===
# [[Circulatory system]]
# ''[[Circulatory system]]''
## [[Blood]]
##'' [[Bloo'd]]''
## [[Heart]]
##'' [[Heart]]''
# [[Endocrine system]]
# [[Endocrine system]]
# [[Gastrointestinal tract]]
''# [[Gastrointestinal tract]'']
## <strike>[[Large intestine]]</strike>
## <strike>[[Large intestine]]</strike>
##<strike> [[Small intestine]]</strike>
##<strike> [[Small intestine]]</strike>
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# [[Integumentary system]]
# [[Integumentary system]]
## <strike>[[Breast]]</strike>
## <strike>[[Breast]]</strike>
## <strike>[[Skin]]</strike>
''## <strike>[[Skin]]</st'rike>''
# [[Nervous system]]
''# [[Nervous system]]''
## [[Brain]]
''## [[Brain]]''
# [[Sensory system]]
# [[Sensory system]]
## [[Auditory system]]
''## [[Auditory system]]
### <strike>[[Ear]]</strike>
''### <strike>[[Ear]]</strike>''''
## [[Gustatory system]]
## [[Gustatory system]]
## [[Olfactory system]]
## [[Olfactory system]]
###<strike>[[Nose]]</strike>
###<strike>[[Nose]]</strike>
## [[Somatosensory system]]
## [[Somatosensory system]]
## [[Visual system]]
''## [[Visual system]]''
###<strike> [[Eye]]</strike>
''###<strike> [[Eye]]</strike>''
# [[Reproductive system]]
# [[Reproductive system]]
## <strike>[[Penis]]</strike>
## <strike>[[Penis]]</strike>
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===[[Biochemistry]]===
===[[Biochemistry]]===
I can proofread any of this group--[[User:DavidGoodman|DG]]
I can proofread any of this group--[[User:DavidGoodman|DG]]
#[[Macromolecule]]s
''#[[Macromolecule]]s''
##[[Nucleic acid]]
''##[[Nucleic acid]]''
### [[DNA]]
''### [[DNA]]''
### [[RNA]]
### [[RNA]]
## [[Protein]]
''## [[Protein]]''
### [[Enzyme]]
''### [[Enzyme]]''
### [[Amino acid]]
### [[Amino acid]]
### [[Peptide]]
### [[Peptide]]
## [[Carbohydrate]]
## [[Carbohydrate]]
## [[Lipid]]
## [[Lipid]]
#[[Metabolism]] [[User:Pedro Silva|PS]]
''#[[Metabolism]]'' [[User:Pedro Silva|PS]]
##[[Glycolysis]]
##[[Glycolysis]]
##[[Krebs cycle]]
##[[Krebs cycle]]
##[[Photosynthesis]]
''##[[Photosynthesis]]''


===[[Botany]]===
===[[Botany]]===
# [[Fungus]]
''# [[Fungus]]''
##[[Yeast]]
# [[Plant]]
# [[Plant]]
##[[Angiosperm]]
##[[Angiosperm]]
###[[Eudicotyledon]]
###[[Eudicotyledon]]
####<strike>[[Arabidopsis thaliana]]</strike>
''####<strike>[[Arabidopsis thaliana]]</strike>''
####<strike>[[Tobacco]]</strike>
####<strike>[[Tobacco]]</strike>
####<strike>[[Oak]]</strike>
####<strike>[[Oak]]</strike>
###[[Monocotyledon]]
###[[Monocotyledon]]
####<strike>[[Maize]]</strike>
''####<strike>[[Maize]]</strike>''
####<strike>[[Rice]]</strike>
####<strike>[[Rice]]</strike>
####<strike>[[Barley]]</strike>
####<strike>[[Barley]]</strike>
Line 122: Line 123:
##[[Fern]]
##[[Fern]]
##[[Gymnosperm]]
##[[Gymnosperm]]
#[[Plant anatomy]]
''#[[Plant anatomy]]''
## [[Leaf]]
## [[Leaf]]
## [[Flower]]
## [[Flower]]
###[[Petal]]
###[[Petal]]
## [[Root]]
## [[Root]]
## [[Stem]]
''## [[Stem]]''
## [[Plant tissue]]s it might be worth merging specific tissues together for context, depending on the final size. [[User talk:Chris day|CD]]
## [[Plant tissue]]s it might be worth merging specific tissues together for context, depending on the final size. [[User talk:Chris day|CD]]
###<strike>[[parenchyma]]</strike>
###<strike>[[parenchyma]]</strike>
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###<strike>[[epidermis]]</strike>
###<strike>[[epidermis]]</strike>
####<strike>[[guard cell]] </strike>
####<strike>[[guard cell]] </strike>
####[[stomate]] (plural: [[stomata]])  
####''[[stomate]] (plural: [[stomata]])''
####<strike>[[trichome]]</strike>
####<strike>[[trichome]]</strike>
####<strike>[[root hair]]</strike>
####<strike>[[root hair]]</strike>
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###[[Ethylene]]
###[[Ethylene]]
###[[Gibberellin]]
###[[Gibberellin]]
#[[Tropism|Plant behavior]]
''#[[Tropism|Plant behavior]]''
##[[Gravitropism]]
##[[Gravitropism]]
##[[Heliotropism]]
##[[Heliotropism]]
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===[[Cell biology]]===
===[[Cell biology]]===
Can copyedit/profread/help[[User:DavidGoodman|DG]]
Can copyedit/profread/help[[User:DavidGoodman|DG]]
#[[Cell division]]
''#[[Cell division]]''
#[[Cell nucleus]]
''#[[Cell nucleus]]''
#[[Cell wall]]
#[[Cell wall]]
#[[Cell membrane]]
#[[Cell membrane]]
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#[[Flagellum]]
#[[Flagellum]]
#[[Organelles]]
#[[Organelles]]
##[[Chloroplast]]
''##[[Chloroplast]]''
##[[Mitochondrion]]
''##[[Mitochondrion]]''
##[[Endoplasmic reticulum]]
''##[[Endoplasmic reticulum]]''
##[[Golgi apparatus]]
##[[Golgi apparatus]]
##[[Vacuole]]
##[[Vacuole]]
#[[Ribosome]]
##''[[Ribosome]]''


===[[Developmental biology]]===
===''[[Developmental biology]]''===
# [[Cellular differentiation]]
# [[Cellular differentiation]]
# [[Stem Cells]]
# [[Stem Cells]]
# [[Cancer]]
# [[Cancer]]
# [[Descriptive embrylogy]]


===[[Ecology]]===
===[[Ecology]]===
# [[Endangered species]]
# [[Endangered species]]
# [[Species]]
''# [[Species]]''


===[[Evolutionary biology]]===
===''[[Evolutionary biology]]''===
[[User:DavidGoodman|DG]]--could work here if needed
[[User:DavidGoodman|DG]]--could work here if needed
#[[Evidence of evolution]]  
#[[Evidence of evolution]]  
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##[[macroevolution]]
##[[macroevolution]]
##[[microevolution]]
##[[microevolution]]
##[[speciation]]
''''##[[Natural selection]]''''
''''##[[speciation]]''''


===[[Genetics]]===
===[[Genetics]]===
[[User:David Tribe|DT]] can edit these topics
[[User:David Tribe|DT]] can edit these topics
#[[Classical genetics]]
''#[[Classical genetics]]''
##[[Mendelian inheritance]]
''##[[Mendelian inheritance]]''
##[[mutation]]
''##[[mutation]]
#[[Clinical genetics]]
''#[[Clinical genetics]]''
##[[Genetic counseling]]
''##[[Genetic counseling]]''
#[[Ecological genetics]]
#[[Ecological genetics]]
#[[Molecular genetics]]
#[[Molecular genetics]]
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[[User:David Tribe|DT]] can edit these topics
[[User:David Tribe|DT]] can edit these topics
# [[Archaea]]
# [[Archaea]]
# [[Bacteria]]
#'' [[Bacteria]]''
===[[Molecular biology]]===
===[[Molecular biology]]===
[[User:David Tribe|DT]] can edit these topics
[[User:David Tribe|DT]] can edit these topics
#[[Polymerase chain reaction]]
#''[[Polymerase chain reaction]]''
#[[Gel electrophoresis]]
#[[Gel electrophoresis]]
#[[Southern blot]]
#[[Southern blot]]
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# [[Digestion]]
# [[Digestion]]
# [[Excretion]]
# [[Excretion]]
# [[Biological reproduction]]
''# [[Biological reproduction]]''
## [[Pregnancy]]  
## [[Pregnancy]]  
## [[Asexual reproduction]]
''## [[Asexual reproduction]]''
## [[Sexual reproduction]]
''## [[Sexual reproduction]]''
# [[Respiration (physiology)]]
# [[Respiration (physiology)]]
===[[Taxonomy]]===
===''[[Taxonomy]]''===
#[[Cladistics]]
#[[Cladistics]]
#[[Systematics]]
#[[Systematics]]
#[[Tree of life]]
#''[[Tree of life]]''
===[[Virology]]===
===''[[Virology]]''===
#[[Bacteriophage]]
#[[Bacteriophage]]
#[[DNA virus]]
#[[DNA virus]]
#[[RNA virus]]
#''[[RNA virus]]''
#[[Diseases caused by Viral Infections]]
#[[Diseases caused by Viral Infections]]
##[[AIDS]]
##''[[AIDS]]''
##[[SARS]]
##[[SARS]]
##[[ Chickenpox|Chicken Pox & Shingles (Varicella)]]
##[[ Chickenpox|Chicken Pox & Shingles (Varicella)]]
===[[Zoology]]===
===[[Zoology]]===
I'm attempting the general article [[User:DavidGoodman|DG]](and can copyedit most of the others)
I'm attempting the general article [[User:DavidGoodman|DG]](and can copyedit most of the others)
# [[Protist]]
#'' [[Protist]]''
# [[Animal]]
#'' [[Animal]]''
## [[Arthropod]]
## [[Arthropod]]
### [[Insect]]
### [[Insect]]
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## [[Chordate]]
## [[Chordate]]
### [[Amphibian]]
### [[Amphibian]]
#### <strike>[[Frog]]</strike>
#### ''<strike>[[Frog]]</strike>''
### [[Fish]]
### [[Fish]]
#### <strike>[[Shark]]</strike>
#### <strike>[[Shark]]</strike>
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#### <strike>[[Cat]]</strike>
#### <strike>[[Cat]]</strike>
#### <strike>[[Cattle]]</strike>
#### <strike>[[Cattle]]</strike>
####[[Canidae|The Dog Family]]
''####[[Canidae|The Dog Family]]''
#####<strike>[[Wolves]]</strike>
''#####<strike>[[Wolves]]</strike>''
#####<strike>[[Grey Wolf]]</strike>
''#####<strike>[[Grey Wolf]]</strike>''
#### <strike>[[Dolphin]]</strike>
#### <strike>[[Dolphin]]</strike>
#### <strike>[[Elephant]]</strike>
''#### <strike>[[Elephant]]</strike>
##### <strike>[[Mammoth]]</strike>
''''##### <strike>[[Mammoth]]</strike>''
#### <strike>[[Horse]]</strike>
#### <strike>[[Horse]]</strike>
#### <strike>[[Sheep]]</strike>
#### <strike>[[Sheep]]</strike>
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### [[Reptile]]
### [[Reptile]]
#### [[Dinosaur]]
#### [[Dinosaur]]
##### [[Bird]]
''##### [[Bird]]''
###### <strike>[[Dove]]</strike>
###### <strike>[[Dove]]</strike>
###### <strike>[[Eagle]]</strike>
###### <strike>[[Eagle]]</strike>
###### <strike>[[Duck]]</strike>
''###### <strike>[[Duck]]</strike>''
###### <strike>[[Chicken]]</strike>
###### <strike>[[Chicken]]</strike>
###### <strike>[[Turkey]]</strike>
###### <strike>[[Turkey]]</strike>
###### <strike>[[Ostrich]]</strike>
###### <strike>[[Ostrich]]</strike>
###### <strike>[[Penguin]]</strike>
###### <strike>[[Penguin]]</strike>
###### <strike>[[Owl]]</strike>
''###### <strike>[[Owl]]</strike>''
#### <strike>[[Snake]]</strike>
#### <strike>[[Snake]]</strike>


Revision as of 00:37, 26 November 2006

Template:Naturalsciences
CORE
Articles Community
Top All Approved Subgroups
Biology workgroup tasks
Suggestions for this page as recommended by Larry Sanger

Still to do: (i) a welcome message aimed at new editors in your area, and perhaps (ii) a link to a version of Citizendium_Pilot:Recruitment_Letter adapted for your discipline. And whatever else seems helpful! (Wiki hackers may notice that several of the above items can be put into a template. We might want to use navigational templates...have at it...)

How you can help
Tasks outlined by Larry Sanger

Launch list of top articles Right now, there is a partial list of high priority articles (see below). We need to transfer that into a different form, i.e., by placing "Category:Biology Workgroup (Top)" at the bottom of articles that are regarded as "high priority" for an area. Note, don't also mark an article you're tagging as "live" unless you've actually worked on it!

Launch workgroup tagging of articles In addition to tagging top articles, whether live or not, we also need to tag live articles according to their likely managing workgroup. So, for instance, one might go to "Category:CZ_Live" and at the bottom of the "xyz" article put "[[Category:Biology Workgroup]]". This means that we think the biology workgroup will be the main group to manage this article. Note, the tag is *not* "[[Category:Biology]]"; that's because we're attaching the article to its *management*.

Launch area managemnet: deferred We should probably defer selection of discipline workgroup management until after more people in each area have arrived, and we have had a chance to finalize how this management will be selected.

Proposed subgroups

The organisation we inherited from wikipedia is subdivided into disciplines within biology, however, we do not have to follow such a format. We can move forward with subgroups that seem more natural, and I imagine some subgroups will include several related disciplines. We can discuss this more on the subgroups thread, in the biology forum, as we reach a critical mass of editors and authors.

Relevant lists and headers from wikipedia are shown at the bottom of this section. Also, the list of high priority articles in the next section are currently categorized by discipline.

List of biology disciplines Template:Biology-footer

High priority articles

This list of articles was copied from the CZ:High priority articles for pilot page. It is not complete but it can be used as a starting point for placing "[[Category:Biology Workgroup (Top)]]" tags. We need to decide which of the articles below should be classified as "Top" and the remainder should be tagged with "[[Category:Biology Workgroup]]" tags.

List of potential editors

Biography

  • (I could proofread any of these--David Goodman)
  1. Charles Darwin - DG (but this is a difficult article to start with)
  2. Carolus Linnaeus -

# Antoni_van_Leeuwenhoek

Anatomy

  1. Circulatory system
    1. Bloo'd
    2. Heart
  2. Endocrine system

# [[Gastrointestinal tract]]

    1. Large intestine
    2. Small intestine
    3. Liver
  2. Integumentary system
    1. Breast

## Skin</st'rike> # Nervous system ## Brain

  1. Sensory system

## Auditory system ### Ear''

    1. Gustatory system
    2. Olfactory system
      1. Nose
    3. Somatosensory system

## Visual system ### Eye

  1. Reproductive system
    1. Penis
    2. Vagina
  2. Respiratory system
    1. Lung
  3. Skeleton

Biochemistry

I can proofread any of this group--DG #Macromolecules ##Nucleic acid ### DNA

      1. RNA

## Protein ### Enzyme

      1. Amino acid
      2. Peptide
    2. Carbohydrate
    3. Lipid

#Metabolism PS

    1. Glycolysis
    2. Krebs cycle

##Photosynthesis

Botany

# Fungus

    1. Yeast
  2. Plant
    1. Angiosperm
      1. Eudicotyledon

####Arabidopsis thaliana

        1. Tobacco
        2. Oak
      2. Monocotyledon

####Maize

        1. Rice
        2. Barley
    2. Bryophyte
      1. Liverwort
      2. Moss
    3. Fern
    4. Gymnosperm

#Plant anatomy

    1. Leaf
    2. Flower
      1. Petal
    3. Root

## Stem

    1. Plant tissues it might be worth merging specific tissues together for context, depending on the final size. CD
      1. parenchyma
      2. collenchyma
      3. sclerenchyma
      4. epidermis
        1. guard cell
        2. stomate (plural: stomata)
        3. trichome
        4. root hair
      5. xylem article could merge together the subcategories CD
        1. vessel element
        2. tracheid
      6. phloem article could merge together the subcategories CD
        1. sieve tube cell
        2. companion cell
  2. Plant physiology
    1. Dehiscence
    2. Flower induction
    3. Nitrogen assimilation
    4. Plant senescence
    5. Wilting
      1. Plasmolysis
    6. Plant hormones
      1. Abscisic acid
      2. Auxin
      3. Brassinosteroid
      4. Cytokinin
      5. Ethylene
      6. Gibberellin

#Plant behavior

    1. Gravitropism
    2. Heliotropism
    3. Phototropism
    4. Thigmotropism

Cell biology

Can copyedit/profread/helpDG #Cell division #Cell nucleus

  1. Cell wall
  2. Cell membrane
  3. Cytoplasm
  4. Cytoskeleton
  5. Flagellum
  6. Organelles

##Chloroplast ##Mitochondrion ##Endoplasmic reticulum

    1. Golgi apparatus
    2. Vacuole
    3. Ribosome

Developmental biology

  1. Cellular differentiation
  2. Stem Cells
  3. Cancer
  4. Descriptive embrylogy

Ecology

  1. Endangered species

# Species

Evolutionary biology

DG--could work here if needed

  1. Evidence of evolution
  2. Processes of evolution:
    1. adaptation
    2. macroevolution
    3. microevolution

'##Natural selection' '##speciation'

Genetics

DT can edit these topics #Classical genetics ##Mendelian inheritance ##mutation #Clinical genetics ##Genetic counseling

  1. Ecological genetics
  2. Molecular genetics
  3. Population genetics
    1. selection
    2. genetic drift
    3. gene flow
  4. Quantitative genetics

Microbiology

DT can edit these topics

  1. Archaea
  2. Bacteria

Molecular biology

DT can edit these topics

  1. Polymerase chain reaction
  2. Gel electrophoresis
  3. Southern blot
  4. Northern blot
  5. Restriction enzyme
  6. Western blot

Physiology

  1. Digestion
  2. Excretion

# Biological reproduction

    1. Pregnancy

## Asexual reproduction ## Sexual reproduction

  1. Respiration (physiology)

Taxonomy

  1. Cladistics
  2. Systematics
  3. Tree of life

Virology

  1. Bacteriophage
  2. DNA virus
  3. RNA virus
  4. Diseases caused by Viral Infections
    1. AIDS
    2. SARS
    3. Chicken Pox & Shingles (Varicella)

Zoology

I'm attempting the general article DG(and can copyedit most of the others)

  1. Protist
  2. Animal
    1. Arthropod
      1. Insect
        1. Ant
        2. Bee
        3. Butterfly
      2. Arachnid
    2. Chordate
      1. Amphibian
        1. Frog
      2. Fish
        1. Shark
      3. Mammal
        1. Ape
          1. Human
        2. Bat
        3. Bear
        4. Camel
        5. Cat
        6. Cattle

####The Dog Family #####Wolves #####Grey Wolf

        1. Dolphin

#### Elephant ''##### Mammoth

        1. Horse
        2. Sheep
        3. Lion
        4. Pig
        5. Whale
      2. Reptile
        1. Dinosaur

##### Bird

            1. Dove
            2. Eagle

###### Duck

            1. Chicken
            2. Turkey
            3. Ostrich
            4. Penguin

###### Owl

        1. Snake

Major topics from wikipedia biology portal

General Life | species | biology
Ecology Biomass | food chain | indicator species | extinction | habitat | species distribution | Gaia theory
Conservation Biodiversity | biodiversity hotspot | nature reserve | edge effect | Allee effect | corridor | fragmentation | pollution | invasive species | in situ - ex situ | seedbank | environmental economics
Evolution Natural selection | genetic drift | sexual selection | speciation | mutation | gene flow
Tree of life Animals | plants | fungi | protists | bacteria | archaea | prokaryote | eukaryote | three-domain system | angiosperms | insects | nematodes | viruses
Development Tissues | fertilization | embryogenesis | gastrulation | neurulation | organogenesis | differentiation | morphogenesis | metamorphosis | ontogeny
Life cycle reproduction | ploidy | spermatogenesis | alternation of generations | oogenesis | parasitism | evolution of sex | meiosis | DNA replication
The cell Cell wall | cell membrane | cytoskeleton | mitochondrion | chloroplast | nucleus | endoplasmic reticulum | Golgi apparatus | cell cycle | mitosis | metabolism | cell signaling | protein targeting
Biochemistry DNA | RNA | protein | enzyme | protein folding | carbohydrate | lipid | glycolysis | citric acid cycle | electron transport chain | oxidative phosphorylation | photosynthesis | protein structure
Genetics Gene | genome | karyotype | transcription | translation | recombination | chromosome | Mendelian inheritance | phenotype | genotype | epigenetics | splicing | mutation | genetic fingerprint | chromatin | classical genetics | ecological genetics | molecular genetics | population genetics | quantitative genetics
Techniques Genetic engineering | transformation | gel electrophoresis | chromatography | centrifugation | cell culture | DNA sequencing | DNA microarray | green flourescent protein | vector | Enzyme assay | Protein purification | Western blot | Northern blot | Southern blot | restriction enzyme | polymerase chain reaction | two-hybrid screening
Other fields Anatomy | astrobiology | botany | bioengineering | bioinformatics | human biology | microbiology | origin of life | paleontology | parasitology | pathology | pharmacology | phylogenetics | physiology | marine biology | systems biology | taxonomy | zoology
Classification of man Primate | mammal | vertebrate | craniata | chordate | deuterostome | animal
History of biology Natural history | geography | ecology | molecular biology | evolutionary biology | Great Chain of Being
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